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View Structure Prediction Details

Protein: ALT2_ARATH
Organism: Arabidopsis thaliana
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALT2_ARATH.

Description E-value Query
Range
Subject
Range
ALT4_ARATH - Acyl-acyl carrier protein thioesterase ATL4, chloroplastic OS=Arabidopsis thaliana GN=ALT4 PE=2 SV=1
190.0 [0..1] [185..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQATSTGAQ IMHAAFPRSW RRGHVLPLRS AKIFKPLACL ELRGSTGIGG FHEIELKVRD  60
   61 YELDQFGVVN NAVYANYCQH GRHEFMDSIG INCNEVSRSG GALAIPELTI KFLAPLRSGC 120
  121 RFVVKTRISG ISLVRIYFEQ FIFKLPNQEP ILEAKGTAVW LDNKYRPTRV PSHVRSYFGH 180
  181 FQCQHLVD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 2av9A
Description: Crystal Structure of the Conserved Hypothetical Protein PA5185 from Pseudomonas Aeruginosa Strain PAO1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.215996736903871 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle