| Protein: | VIL2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 714 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VIL2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
746.0 | [0..1] | [714..1] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MDSSLDGAAG DSSKCSEMSV DEKRQLVYEL SKQSHLAAEV LQAWSRQEIL QILCAEMGKE 60
61 RKYTGLTKVK IIETLLKIVS EKNSGECEGK KRDSDCLPIQ RNTKRQRKVD NPSRYVIP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [119-288] |
1 11 21 31 41 51
| | | | | |
1 ATNIVTSNNA SGSCSSVNTK GESTTIYCKN LACRAVLRQE DSFCRRCSCC ICRKYDDNKD 60
61 PSLWLTCSSD PPFEGESCGF SCHLECAFNT EKSGLGKDKQ SEGCCFYCVS CGKANSLLEC 120
121 WKKQLTIAKE TRRVEVLCYR LFLVQKLLKS STKYRNLCEV VDEAVKTLEA
|
| Detection Method: | |
| Confidence: | 1.18 |
| Match: | 2e6sA |
| Description: | No description for 2e6sA was found. |
|
Region A: Residues: [289-631] |
1 11 21 31 41 51
| | | | | |
1 DVGPLTGLPM KMGRGIVNRL HSGPDVQKLC SSALESLETI ATTPPDVAAL PSPRSSKMQQ 60
61 DCSYVLSNEI SADTATTGST KIRFEDVNAT SLTVVLASNE IPSPPNIVHY SIWHRKVPEK 120
121 DYPEKSTCTL FIPNTRFVVS GLAPASEYCF KVVSYSGTRE MGVDEINVLT RSAEEGANCS 180
181 SAVERSVSPL TNCSTLSSNP SSVEAESNND YIVPKKPSSK NEDNNSPSVD ESAAKRMKRT 240
241 TDSDIVQIEK DVEQIVLLDD EEQEAVLDKT ESETPVVVTT KSLVGNRNSS DASLPITPFR 300
301 SDEIKNRQAR IEISMKDNCN NGDHSANGGT ESGLEHCVKI IRQ
|
| Detection Method: | |
| Confidence: | 37.69897 |
| Match: | 1fnfA |
| Description: | FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [632-714] |
1 11 21 31 41 51
| | | | | |
1 LECSGHIDKN FRQKFLTWYS LRATSQEIRV VKIFIDTFID DPMALAEQLI DTFDDRVSIK 60
61 RSAVGGSGAS AVVPSGFCMK LWH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
