| Protein: | gi|2832628, gi|7... |
| Organism: | Arabidopsis thaliana |
| Length: | 406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2832628, gi|7....
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..20] | [402..709] |
|
|
343.0 | [0..20] | [402..114] |
|
|
342.0 | [0..20] | [402..97] |
|
|
330.0 | [0..114] | [402..5] |
|
|
322.0 | [0..87] | [402..5] |
|
|
317.0 | [0..5] | [402..217] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MQELDSSNDE WVKELEGENE ESKFTGRRLV KKSISVPELV DEVEEDLDDF TEPADDFNDK 60
61 VGKKRQRKKK DESGLEKTKK NKKQNSEEVQ EMWDSITNNT NSQYGDKVVV KPPKKKDEDA 120
121 EEIKKLFSLR KKKSKCDKTS MEIGMQVEQV MANLEIAVED DVICNREGKP AINKLMKLPL 180
181 L
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [182-297] |
1 11 21 31 41 51
| | | | | |
1 NETLSKKPLQ GEFLDHGVLN LLKNWLEPLP DGSLPNINIR SAVLMILNDF RIDLDQDSRR 60
61 EQLIKSGLGK VIMFLSKSDE ETTPNRRLAN DIINKWGRII YNKSTRYDNM FTQEEL
|
| Detection Method: | |
| Confidence: | 1.34 |
| Match: | 1eo0A |
| Description: | Transcription elongation factor TFIIS N-domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [298-406] |
1 11 21 31 41 51
| | | | | |
1 DEQRQILLRR QTKTAPKVSG TRARDFNTDI DLYELGTWTG RARAKIPTTM SMDFKIRPPS 60
61 KVDINQEEEP CSKWQMEKRH KNKQQKNIRK GGMQALKLSV DGRTMLKYL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
