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View Structure Prediction Details

Protein: gi|11357569, gi|...
Organism: Arabidopsis thaliana
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11357569, gi|....

Description E-value Query
Range
Subject
Range
gi|4589958, gi|3... - gi|55740583|gb|AAV63884.1| hypothetical protein [Arabidopsis thaliana], gi|4589958|gb|AAD26476.1| hy...
150.0 [0..1] [181..1]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMLIKHLT LPSSLLVFVF FAFTVADAMS IKDMYAFCKD TDDVNFCLKY IGTDIRILAA  60
   61 RDLHDVLVIA ISQCQIQLTK ATKQINKVRQ KFSGPIGTRR LYFCGKHYCL ASAFFQKAYE 120
  121 EAQEEGLESI AQLSAVDGSH YMFKCEDEWK NNGPIQKSPF TFYYTNVVEL LSIIQVIIEK 180
  181 MYG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle