| Protein: | CAAT6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 583 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAAT6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
424.0 | [0..9] | [567..924] |
|
Region A: Residues: [1-494] |
1 11 21 31 41 51
| | | | | |
1 MEVQSSSNNG GHSSFSSLRV YLNSLSATPS RLSRRAISVS TSSDEMSRVR AVSGEQMRRT 60
61 LRWYDLIGLG IGGMVGAGVF VTTGRASRLD AGPSIVVSYA IAGLCALLSA FCYTEFAVHL 120
121 PVAGGAFSYI RITFGEFPAF FTGANLVMDY VMSNAAVSRS FTAYLGTAFG ISTSKWRFVV 180
181 SGLPKGFNEI DPVAVLVVLV ITVIICCSTR ESSKVNMIMT AFHIAFIFFV IVMGFIKGDS 240
241 KNLSSPANPE HPSGFFPFGA AGVFNGAAMV YLSYIGYDAV STMAEEVENP VKDIPVGVSG 300
301 SVAIVTVLYC LMAVSMSMLL PYDLIDPEAP FSAAFRGSNG WEWVTKVVGI GASFGILTSL 360
361 LVAMLGQARY MCVIGRSRVV PFWFAKIHPK TSTPVNASTF LGIFTAALAL FTDLNVLLNL 420
421 VSIGTLFVFY MVANALIFRR YVPVGPTKPW PTLCFLTLFS ITSLVFTLIW KLVPEGKPKA 480
481 FMLGASAVVA IAIV
|
| Detection Method: |  |
| Confidence: | 3.045757 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [495-583] |
1 11 21 31 41 51
| | | | | |
1 LSFQCVVPQA RKPELWGVPF MPWTPCVSIF LNIFLLGSLD APSYVRFGFF SGLIVLVYLF 60
61 YGVHASSDAE ANGSFGVKDG QVMKELIEV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
