| Protein: | gi|11358053, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 491 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11358053, gi|....
| Description | E-value | Query Range |
Subject Range |
|
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474.0 | [0..3] | [491..28] |
|
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473.0 | [0..1] | [491..1] |
|
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473.0 | [0..2] | [491..30] |
|
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467.0 | [0..4] | [491..29] |
|
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456.0 | [0..6] | [430..52] |
|
|
451.0 | [0..6] | [430..57] |
|
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451.0 | [0..6] | [430..57] |
|
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450.0 | [0..4] | [491..27] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MELEFESKYE INRTAEFIIS KSFTRIALQF PDELLKDSTK VVSALKSKTR LLTDREVRFF 60
61 VMADTTYGSC CIDEVGALHI DSECVVHYGQ TCLSPTSVLP AFFVFGKASI NVSSCVKHLI 120
121 DYASKSDKPI MILY
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.768 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.767 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.744 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.731 | N/A | N/A | c.1.3 | Thiamin phosphate synthase |
| View | Download | 0.720 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.714 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.700 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.700 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.694 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.680 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.678 | N/A | N/A | c.116.1 | alpha/beta knot |
| View | Download | 0.639 | N/A | N/A | c.116.1 | alpha/beta knot |
| View | Download | 0.590 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.584 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.578 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
|
Region A: Residues: [135-225] |
1 11 21 31 41 51
| | | | | |
1 GLEYAHVIPQ IREELGLSKT DSQLSVANVL CSFISPSKDP RESMEHPRPY SESDSSDSLS 60
61 SSRSYRLGGL TWDLPEGSKI EDYLLFWIGS D
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.372 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.372 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.355 | a.3.1 | Cytochrome c |
| View | Download | 0.302 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.302 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.297 | a.59.1 | PAH2 domain |
| View | Download | 0.297 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.292 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.282 | d.82.2 | Frataxin-like |
| View | Download | 0.256 | a.24.3 | Cytochromes |
|
Region A: Residues: [226-388] |
1 11 21 31 41 51
| | | | | |
1 SSAFANVVLT FNGCDIVRYD AEEDSLVTEF YQQRRILKRR YYLVEKAKDA NIIGILVGTL 60
61 GVAGYLHMIH HMQALISAAG KKSYILAMGR PNPAKLANFP ECDVFIYISC AQTALLDSKE 120
121 FMSPVITPFE ANLAFSRGSE WTGAYLMHFQ DVINSVKSES EAH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [389-491] |
1 11 21 31 41 51
| | | | | |
1 IGSEEPRFSF FQGGYVEDHK TNDQAKNGEE DTGETMTLVQ AAEKALQLRG NDHNSLTKQT 60
61 AAKSGPEYFL NRVYRGLEIN SENTLPEPYI VGRSGKASGY KHE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.734 | a.130.1 | Chorismate mutase II |
| View | Download | 0.595 | a.130.1 | Chorismate mutase II |
| View | Download | 0.595 | a.130.1 | Chorismate mutase II |
| View | Download | 0.498 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.463 | a.4.1 | Homeodomain-like |
| View | Download | 0.458 | a.74.1 | Cyclin-like |
| View | Download | 0.458 | a.74.1 | Cyclin-like |
| View | Download | 0.455 | a.77.1 | DEATH domain |
| View | Download | 0.450 | a.1.1 | Globin-like |
| View | Download | 0.387 | a.240.1 | Description not found. |
| View | Download | 0.368 | a.4.12 | TrpR-like |
| View | Download | 0.334 | a.240.1 | Description not found. |
| View | Download | 0.327 | a.4.1 | Homeodomain-like |
| View | Download | 0.318 | a.59.1 | PAH2 domain |
