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View Structure Prediction Details

Protein: RLF_ARATH
Organism: Arabidopsis thaliana
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF_ARATH.

Description E-value Query
Range
Subject
Range
gi|9758996 - gi|9758996|dbj|BAB09523.1| unnamed protein product [Arabidopsis thaliana]
227.0 [0..1] [211..65]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSRDDDFT FSKVSPPDSE VKDLASDVGS ITLKDGLDQQ KSNGLIWKDK SLPPKEETIG  60
   61 SLSFTVTDSS SSKKQSNESS ETFKTPARKP ITRTKVPFEK GYSQMDWLKL TRTHPDLAGL 120
  121 KG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESNKRLIPMD EVKKHRTGDS MWTVLKGRVY NISPYMNFHP GGVDMLMKAV GRDGTLLFNK  60
   61 YHAWVNVDIL LEKCLVGVLD DTKVKKQEP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.154902
Match: 2ibjA
Description: No description for 2ibjA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle