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View Structure Prediction Details

Protein: gi|7635452, gi|1...
Organism: Arabidopsis thaliana
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7635452, gi|1....

Description E-value Query
Range
Subject
Range
gi|10178207 - gi|10178207|dbj|BAB11631.1| unnamed protein product [Arabidopsis thaliana]
228.0 [0..10] [271..1]

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Predicted Domain #1
Region A:
Residues: [1-53]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLSRNNDIM IPAPRSGDYR NFLDLLSPYP LFTELIHVPS IIFSDTFNTL KTL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.487 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.487 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.408 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.408 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.392 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.392 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.390 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.390 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.338 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.338 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.217 N/A N/A a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.202 N/A N/A a.159.5 Description not found.

Predicted Domain #2
Region A:
Residues: [54-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPMSFYHLSG LNRRQTLYGF LNLHGRELHV GENPPVLLRF ITRHLRILVF ASSNGLSLPN  60
   61 DYLSSSSLED FKPFTLYTTS IRYGLPKLQS HLTAALPLNL THRSTVFARA LVKALPRVVC 120
  121 LVPPSFTSLT LTPTPLRLLT MTNCSSFDLL LEDLSISFDL TCTNKLPSFW FKALKDLISI 180
  181 NPIYPFMFLM LSYLMFSLGY ALYCDVLNFG NSFPLHLCIW FPW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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