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View Structure Prediction Details

Protein: BPM2_ARATH
Organism: Arabidopsis thaliana
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BPM2_ARATH.

Description E-value Query
Range
Subject
Range
BPM1_ARATH - BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana GN=BPM1 PE=1 SV=1
294.0 [0..31] [406..32]

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Predicted Domain #1
Region A:
Residues: [1-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM  60
   61 VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL FELTLVDQSG NERHKVHSHF 120
  121 GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN 180
  181 IPVPVSGLGQ QFGKLLESGK GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT 240
  241 NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR 300
  301 TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES 360
  361 CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR VKQRLH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.0
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle