| Protein: | gi|15225742, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 333 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15225742, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..2] | [333..8] |
|
|
242.0 | [0..22] | [317..5] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MVMKIAIATE RTDLPRLVST AIRASNSQNA SDVERCFDVL RYLKGLNLSV KNLSHSKVIL 60
61 PLESLRDHEN PKIRTEAHVL FTSWMKTFYS SGQNSSSTCN KPNPLKLKKV VKACSELKKK 120
121 NEEQLSHGFA VLKAKKETVF LGMKKNEDER SRVHETREMK
|
| Detection Method: |  |
| Confidence: | 2.82 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [161-233] |
1 11 21 31 41 51
| | | | | |
1 QIGDSKSFAL MRTIEKKKQS ASPIQGSKNP RSGAGETGVI KKILRKPDFC CKSVPSRPPL 60
61 NMKKHQPVKA FEN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [234-333] |
1 11 21 31 41 51
| | | | | |
1 PKTCLVLKKN SPEMLELFEM AKKSADVANA KGFLAAKEEA SICVDILALL MKFSIISTAI 60
61 ETRRIMEKLE RLTKHKDRKI CNAALALLHH WRQTIRNQQQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.937 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
