| Protein: | gi|22330308, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 486 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22330308, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
535.0 | [0..36] | [484..1] |
|
|
491.0 | [0..39] | [478..1] |
|
|
489.0 | [0..36] | [478..204] |
|
|
488.0 | [0..39] | [478..1] |
|
|
487.0 | [0..39] | [478..1] |
|
|
478.0 | [0..39] | [478..1] |
|
|
477.0 | [0..38] | [484..2] |
|
Region A: Residues: [1-249] |
1 11 21 31 41 51
| | | | | |
1 MIWSLLKIYV LMLCTISTVY NTFLLIVCVV GCCVQMEEIV FETKDAVDWS YRSEGVVNLV 60
61 LAYSGSSPTF LGKVMRIKKL RNTRNENRDR SGSCLTTQEK LIWGEIKDLV SCQNKEIVDY 120
121 LFVKHVMKPL LGHKYVTPGI CLPVEKEFLE SVKKIVTSQR HSWRANTLSV DTNRSFALLM 180
181 DDLTIFSHGQ VEDHKPCLTV EIKPKCGFLS SSSFIAEENV IKKSISRFEM YQVLKLRENQ 240
241 ISQISEYDP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [250-333] |
1 11 21 31 41 51
| | | | | |
1 LDLFSGSKDR IHKAIKALYS TPQNSLQVFL NGSLVFGGFR GGICKTTSKL ELAFEHTLKD 60
61 FFKTEDDCGL RANAFIELVA ETVY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.676 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.626 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.609 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.487 | d.73.1 | RuBisCO, small subunit |
| View | Download | 0.476 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.456 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.430 | a.29.2 | Bromodomain |
| View | Download | 0.401 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.397 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.397 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [334-486] |
1 11 21 31 41 51
| | | | | |
1 ASGALDQLLE VQKLDKYNIE GAIHAYYDLV DQPCKACQEL ESSKLSNQFG SMHSLPQDEK 60
61 VNILKDFLIS STAIDCSVMI SFRPIETGLS RSSSHGNIQL ESTKQEFEYK IHFIDLDMRP 120
121 LKRMEAYHES DKKITKTYQE MLKKKKGDQP RRF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
