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View Structure Prediction Details

Protein: gi|15238224, gi|...
Organism: Arabidopsis thaliana
Length: 200 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238224, gi|....

Description E-value Query
Range
Subject
Range
gi|33239415, gi|... - gi|33239415|ref|NP_778169.1| Bcl-2 inhibitor of transcription isoform a [Mus musculus], gi|26324504|...
196.0 [0..29] [184..32]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAVLSAAF RFPIVTRRLS APAPRIRFYH STIRFAHFRR FTTASPSMSQ QTGEIDAVVD  60
   61 ASSAEKPDDV VVQYVVLRRD LIDSWPLGSV VTQGCHASVA AIWSFKDDPV TLQYCDPQHI 120
  121 DSMHKVTLEV KGETQMMNLS EKLKLGGISH KLWMEQPENI PTCIATKPYP KSQVSSFFKK 180
  181 LKLCKNTIHK ASQRFGYMYI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.522879
Match: 1q7sA
Description: Crystal structure of bit1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle