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View Structure Prediction Details

Protein: WTR13_ARATH
Organism: Arabidopsis thaliana
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WTR13_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553757 - gi|21553757|gb|AAM62850.1| nodulin-like protein [Arabidopsis thaliana]
203.0 [0..19] [380..1]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP  60
   61 FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM KYTTATFATA MYNVLPAITF 120
  121 VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 11.443697
Match: PF00892.11
Description: No description for PF00892.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [167-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WTKGVSAHNT AGTDIHSAIK GAVLVTIGCF SYACFMILQA ITLRTYPAEL SLTAWICLMG  60
   61 TIEGTAVALV MEKGNPSAWA IGWDTKLLTA TYSGIVCSAL AYYVGGVVMK TRGPVFVTAF 120
  121 SPLCMIIVAI MSTIIFAEQM YLGRVLGAVV ICAGLYLVIW GKGKDYKYNS TLQLDDESAQ 180
  181 PKLELSGNGK DNVDHEVITI SKQGEQRRTA VETV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.37
Match: 2i68A
Description: No description for 2i68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle