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View Structure Prediction Details

Protein: gi|15219578, gi|...
Organism: Arabidopsis thaliana
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15219578, gi|....

Description E-value Query
Range
Subject
Range
gi|25354706, gi|... - gi|84778482|dbj|BAE73268.1| xylogen like protein 12 [Arabidopsis thaliana], pir||E96594 unknown prot...
126.0 [0..2] [162..5]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTLLITL LISLSAFFLR MVLAQVPATC ASRLLSLAPC GPFVQGFAQL PAQPCCDSLN  60
   61 QIYSQEATCL CLFLNNTSTL SPAFPINQTL ALQLPPLCNI PANSSTCSSS FPGEAPSDSS 120
  121 SVAPPPSSST GSQISQGAKN NSRVAATPVA QMAPRPTSFM GLGYGLKSSG SKSEIQLTIF 180
  181 ALAAILPAAL LLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1be2A
Description: LIPID TRANSFER PROTEIN COMPLEXED WITH PALMITATE, NMR, 10 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle