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View Structure Prediction Details

Protein: 3HID1_ARATH
Organism: Arabidopsis thaliana
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 3HID1_ARATH.

Description E-value Query
Range
Subject
Range
gi|89336363, gi|... - gi|89896915|ref|YP_520402.1| tartronate semialdehyde reductase [Desulfitobacterium hafniense Y51], g...
214.0 [0..38] [333..1]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLLLRRFPS PSVVSSFFLR RSMASSTISS DIITPSNTKI GWIGTGVMGR SMCGHLIKAG  60
   61 YTVTVFNRTI SKAQTLIDMG ANVADSPNSV AEQSDVVFTI VGYPSDVRHV LLDPKSGALS 120
  121 GLRQGGVLVD MTTSEPSLAE EIAKAASFKN CFSIDAPVSG GDLGAKNGKL SIFAGGDETT 180
  181 VKRLDPLFSL MGKVNFMGTS GKGQFAKLAN QITIASTMLG LVEGLIYAHK AGLDVKKFLE 240
  241 AISTGAAGSK SIDLYGDRIL KRDFDPGFYV NHFVKDLGIC LNECQRMGLA LPGLALAQQL 300
  301 YLSLKAHGEG DLGTQALLLA LERLNNVSVQ SSDS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 1yb4A
Description: Crystal Structure of the Tartronic Semialdehyde Reductase from Salmonella typhimurium LT2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle