| Protein: | gi|25406184, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 509 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25406184, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
441.0 | [0..2] | [509..6] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MLLHLLLLLC LSSSLKVQAS VHEYRSERFV SKGNAFVFHG GSEGIYSSSP SDNFTSDSDS 60
61 VSFIRFEKIK FQRPEEVSNR SSLSIHAVVF EVEDRENIGG SAYGGQRAVC CTSDLAKLGV 120
121 CSHGDVIYRP SAKDSGWPQV FGVSLAENEF SVIL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [155-509] |
1 11 21 31 41 51
| | | | | |
1 PTRSIQVTRT GMYNLYFIHC DSDLKDLVVE GKTIWKNPTG YLPGRMAPLM YFYGFMSLAF 60
61 VLLGIFWFSQ CARFWREVLP LQNCLTLVIT LGMCEMALWY FDYAEFNETG IRPTVITIWA 120
121 VTFGSIKRTS ARIIILMVSM GYGVVRPTLG GFTSKVIMLG VTFFIASEIL ELMENVGAVS 180
181 DLSGKARLFF VLPVAILDAF FIIWIFKSLS ATFKKLQTRR LLVKLDIYRK FTNALAVDIL 240
241 VSLGWICYEL YFKSKDVYNE HWQNAWIIPA FWQLLSFSLL IVICSLWAPS QNSTRYAFSG 300
301 SSGDTSAEFE KDDYTLTLIK PSPIPSHEVK NLSETRLLPA DEGEPEKDLE EDKRE
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
