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View Structure Prediction Details

Protein: gi|15230481, gi|...
Organism: Arabidopsis thaliana
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230481, gi|....

Description E-value Query
Range
Subject
Range
gi|15230500, gi|... - gi|15795165|dbj|BAB03153.1| unnamed protein product [Arabidopsis thaliana], gi|15230500|ref|NP_18785...
220.0 [0..1] [237..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTIRTIGT YATQQRYLVD FFGEEFIVIV TPDPSVIGQW IHDVLSHNRF SSHPLVVGVG  60
   61 VQWTPSSYYS ASSPVRYRSD SPPVRYRSDS PRVRRRFDPP ADTLQLCVGN RCIIIQLSHC 120
  121 ERVPQVLRNF LADRDYTFVG IWNSQDAGKL KRSKHELEIA VLLDLRKFVS DSSGRTMKRC 180
  181 SFEKIVEENL GHSGVRLDRK VSRSDWRVYD LRYVQILQAS IDVYACCKLA ILDHLWEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 1dpiA
Description: STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle