| Protein: | SL30A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 262 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SL30A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
169.0 | [0..24] | [245..26] |
|
Region A: Residues: [1-262] |
1 11 21 31 41 51
| | | | | |
1 MRGRSYTPSP PRGYGRRGRS PSPRGRFGGS RDSDLPTSLL VRNLRHDCRQ EDLRRPFEQF 60
61 GPVKDIYLPR DYYTGDPRGF GFIQFMDPAD AAEAKHQMDG YLLLGRELTV VFAEENRKKP 120
121 TEMRTRDRGG RSNRFQDRRR SPPRYSRSPP PRRGRRSRSR SRGYNSPPAK RHQSRSVSPQ 180
181 DRRYEKERSY SRSPPHNGSR VRSGSPGRVK SHSRSPRRSV SPRKNRSYTP EQARSQSPVP 240
241 RQSRSPTPVP RGAQNGDRSP SQ
|
| Detection Method: |  |
| Confidence: | 39.30103 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
