| Protein: | gi|20258971, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 447 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20258971, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
588.0 | [0..1] | [447..1] |
|
|
448.0 | [0..1] | [439..1] |
|
|
382.0 | [0..22] | [421..1] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MGRESLAVVS SPPSATAPST AVSATSLAPG FRFHPTDEEL VSYYLKRKVL GKPVRFDAIG 60
61 EVDIYKHEPW DLAVFSKLKT RDQEWYFFSA LDKKYGNGAR MNRATNKGYW KATGKDREIR 120
121 RDIQLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE TNGSLLQDAY VLCRVFHKNN 180
181 IG
|
| Detection Method: |  |
| Confidence: | 67.69897 |
| Match: | 1ut4A |
| Description: | Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [183-279] |
1 11 21 31 41 51
| | | | | |
1 PPSGNRYAPF MEEEWADGGG ALIPGIDVRV RVEALPQANG NNQMDQEMHS ASKDLININE 60
61 LPRDATPMDI EPNQQNHHES AFKPQESNNH SGYEEDE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.388 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.326 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.326 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.263 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.262 | c.23.14 | Nucleoside 2-deoxyribosyltransferase |
| View | Download | 0.250 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.250 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.205 | a.66.1 | Transducin (alpha subunit), insertion domain |
|
Region A: Residues: [280-364] |
1 11 21 31 41 51
| | | | | |
1 DTLKREHAEE DERPPSLCIL NKEAPLPLLQ YKRRRQNESN NNSSRNTQDH CSSTITTVDN 60
61 TTTLISSSAA AATNTAISAL LEFSL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.408 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.375 | a.24.20 | Description not found. |
| View | Download | 0.362 | a.29.10 | Description not found. |
| View | Download | 0.359 | a.46.3 | Description not found. |
| View | Download | 0.338 | a.24.28 | Description not found. |
| View | Download | 0.327 | d.42.1 | POZ domain |
| View | Download | 0.327 | d.42.1 | POZ domain |
| View | Download | 0.267 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.260 | a.29.2 | Bromodomain |
| View | Download | 0.253 | a.133.1 | Phospholipase A2, PLA2 |
|
Region A: Residues: [365-447] |
1 11 21 31 41 51
| | | | | |
1 MGISDKKENQ QKEETSPPSP IASPEEKVND LQKEVHQMSV ERETFKLEMM SAEAMISILQ 60
61 SRIDALRQEN EELKKKNASG QAS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
