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View Structure Prediction Details

Protein: WHY1_ARATH
Organism: Arabidopsis thaliana
Length: 263 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WHY1_ARATH.

Description E-value Query
Range
Subject
Range
WHY3_ARATH - Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana GN=WHY3 PE=1 SV=1
453.0 [0..1] [263..1]

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Predicted Domain #1
Region A:
Residues: [1-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLLSTPLM AVNSNPRFLS SSSVLVTGGF AVKRHGFALK PTTKTVKLFS VKSRQTDYFE  60
   61 KQRFGDSSSS PSPAEGLPAR FYVGHSIYKG KAALTVDPRA PEFVALDSGA FKLSKDGFLL 120
  121 LQFAPSAGVR QYDWSKKQVF SLSVTEIGTL VSLGPRESCE FFHDPFKGKS DEGKVRKVLK 180
  181 VEPLPDGSGH FFNLSVQNKL VNVDESIYIP ITRAEFAVLI SAFNFVLPYL IGWHAFANSI 240
  241 KPEETSRVNN ASPNYGGDYE WNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 1l3aA
Description: Plant transcriptional regulator PBF-2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle