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View Structure Prediction Details

Protein: NFYA5_ARATH
Organism: Arabidopsis thaliana
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFYA5_ARATH.

Description E-value Query
Range
Subject
Range
NFYA3_ARATH - Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2
283.0 [0..11] [307..25]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS  60
   61 QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP IENYTKSITT SSMVSQDSVF 120
  121 PAPTSGQISW SLQCAETSHF NGFLAPEYAS TP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TALPHLEMMG LVSSRVPLPH HIQENEPIFV NAKQYHAILR RRKHRAKLEA QNKLIKCRKP  60
   61 YLHESRHLHA LKRARGSGGR FLNTKKLQES SNSLCSSQMA NGQNFSMSPH GGGSGIGSSS 120
  121 ISPSSNSNCI NMFQNPQFRF SGYPSTHHAS ALMSGT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.69897
Match: PF02045.6
Description: No description for PF02045.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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