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View Structure Prediction Details

Protein: gi|15228202, gi|...
Organism: Arabidopsis thaliana
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15228202, gi|....

Description E-value Query
Range
Subject
Range
gi|34496725, gi|... - gi|34496725|ref|NP_900940.1| dipeptidyl anminopeptidase [Chromobacterium violaceum ATCC 12472], gi|3...
171.0 [0..5] [306..326]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLLHNFNF VPQDSPYYKT SPFPTSSFFN VRFPIKNNQI SCNKAKNLRM DPSKGIQEQR  60
   61 IVIPNRHNEK LVGLLHETGS TDIVVLCHGF RSNKSNQIMN NVAAAIQKEG ISAFRFDFSG 120
  121 NGESEGSFYY GNYNHEADDL HSVVQYFSNK NRVVPIILGH SKGGDVVLLY ASKYHDVRNV 180
  181 INLSGRYDLK KGIRERLGED FLERIKQQGF IDVGDGKSGY RVTEKSLMDR LSTDIHEACL 240
  241 KIDKECRVLT VHGSEDEVIP VEDAKEFAKI IPNHKLEIVE GANHGYTEHQ SQLVSTVMEF 300
  301 IKTVIVKNN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.154902
Match: 2bklA
Description: Structural and Mechanistic Analysis of Two Prolyl Endopeptidsases: Role of Inter-Domain Dynamics in Catalysis and Specificity
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle