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View Structure Prediction Details

Protein: gi|18414227, gi|...
Organism: Arabidopsis thaliana
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18414227, gi|....

Description E-value Query
Range
Subject
Range
gi|14423558, gi|... - gi|20148293|gb|AAM10037.1| putative protein [Arabidopsis thaliana], gi|14423558|gb|AAK62461.1|AF3870...
301.0 [0..1] [495..1]

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Predicted Domain #1
Region A:
Residues: [1-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIDKAIGES DDKRLKTKYN NAIFVIKRAL ALYSIEEVAF SFNGGKDSTV LLHLLRAGYF  60
   61 LHKKEQTCSN GGLSSFPVRT IYFESPSAFT EINAFTYDAA QTYNLQLDII RQDFKSGLEA 120
  121 LLKANPIRAI FLGVRIGDPT AVGQEQFSPS SPGWPPFMRV NPILDWSYRD VWAFLLTCKV 180
  181 KYCSLYDQGY TSIGSIHDTV PNSLLSVNDT SSKEKFKPAY LLSDGRLERA GRVKKIASLK 240
  241 KDVDTESQKH EVLLASVIAV GDEILSGTVE DQLGLSLCKK LTSVGWSVQQ TTVLR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.045757
Match: 1zunA
Description: Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.19930793139888 bayes_pls_golite062009
ligase activity 0.120145457770252 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 0.0805874101494609 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [296-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDIDSVSEEV DRQRSTSDMV FIYGGVGPLH SDVTLAGVAK AFGVRLAPDE EFEEYLRHLI  60
   61 SDQCTGDRNE MAQLPEGITE LLHHEKLSVP LIKCRNVIVL AATNTEELEK EWECLTELTK 120
  121 LGGGSLIEYS SRRLMTSLTD VEVAEPLSKL GLEFPDIYLG CYRKSRQGPI IICLTGKDNA 180
  181 RMDSAAQALR KKFKKDVFVE IK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 2nquA
Description: No description for 2nquA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 1.9303555688427 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle