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View Structure Prediction Details

Protein: RLF10_ARATH
Organism: Arabidopsis thaliana
Length: 73 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF10_ARATH.

Description E-value Query
Range
Subject
Range
RLF26_ARATH - Protein RALF-like 26 OS=Arabidopsis thaliana GN=RALFL26 PE=3 SV=1
97.0 [0..1] [73..1]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALVICLLV IFAAVIAVPV ESRRKHLDYG VITKCAGPNP PPGCYPPGAQ QKNPTPANEY  60
   61 RRGCSKITRC KRD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 20.431798
Match: PF05498.2
Description: No description for PF05498.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.335 N/A N/A d.58.23 Probable ACP-binding domain of malonyl-CoA ACP transacylase
View Download 0.253 N/A N/A a.159.2 FF domain
View Download 0.243 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.235 N/A N/A a.4.1 Homeodomain-like
View Download 0.232 N/A N/A a.4.10 N-terminal Zn binding domain of HIV integrase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle