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View Structure Prediction Details

Protein: GT644_ARATH
Organism: Arabidopsis thaliana
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GT644_ARATH.

Description E-value Query
Range
Subject
Range
gi|7339684, gi|9... - gi|9910530|ref|NP_064482.1| exostoses-like 3 [Rattus norvegicus], gi|7339684|dbj|BAA92895.1| Reg rec...
382.0 [0..62] [328..649]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGEVSKEM GACSLAYRRG DQKLRKFVTA RSTKFLLFCC IAFVLVTIVC RSSRPWVNSS  60
   61 IAVADRISGS RKGYTLLMNT WKRYDLLKKS VSHYASCSRL DSIHIVWSEP NPPSESLKEY 120
  121 LHNVLKKKTR DGHEVELRFD INKEDSLNNR FKEIKDLKTD AVFSIDDDII FPCHTVDFAF 180
  181 NVWESAPDTM VGFVPRVHWP EKSNDKANYY TYSGWWSVWW SGTYSMVLSK AAFFHKKYLS 240
  241 LYTNSMPASI REFTTKNRNC EDIAMSFLIA NATNAPAIWV KGKIYEIGST GISSIGGHTE 300
  301 KRTHCVNRFV AEFGKMPLVY TSMKAVDSRN LWFW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.522879
Match: 1omxA
Description: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.49077887406072 bayes_pls_golite062009
transferase activity 1.16837290016241 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle