| Protein: | gi|6730725, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 414 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6730725, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
325.0 | [0..1] | [413..1] |
|
Region A: Residues: [1-179] |
1 11 21 31 41 51
| | | | | |
1 MALHLARPKQ RLHSNPSLIH LFSTSSSSSS SSPQDGNESN EQPSQSSSDY KISSYFSGIR 60
61 SSLKQTQSQD GKRQFVRFDA KPQNSLSGNQ DIRRNLNEFR SRATAPPPRD MQDLFKQNVL 120
121 SKSGGTRRIE GVPLTNIKAN LRQMRPQQAT TESKWANLSG IQNIMKTNIN DNIRSNVIG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [180-302] |
1 11 21 31 41 51
| | | | | |
1 GAAEGLPHSV VGKELEEEDV TEEEMKSEFI KSYDPIELGE KLRLYRPEGK KEEGWFSLQE 60
61 LNQRLVKLRA MEEEQFQKTS IVHPSFVNNL RSEFHKFTKA QKSDPFQNTN IWGVLSGTPK 120
121 YML
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [303-414] |
1 11 21 31 41 51
| | | | | |
1 EPPKDQLVET YFHPDNMSSA EKMKIELAKV REEFKMSESD CGSARVQVAQ LTTKIKHLSS 60
61 VLHKKDKHSR KGLIAMVQRR KKLLKYMRRT DWDSYCLSLS KLGLRDNPDY KF
|
| Detection Method: | |
| Confidence: | 39.522879 |
| Match: | 1a32A |
| Description: | RIBOSOMAL PROTEIN S15 FROM BACILLUS STEAROTHERMOPHILUS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 10.0789865019321 | bayes_pls_golite062009 |
| structural molecule activity | 9.50403295759084 | bayes_pls_golite062009 |
| RNA binding | 1.51065002653781 | bayes_pls_golite062009 |
| binding | 1.25122902411457 | bayes_pls_golite062009 |
| nucleic acid binding | 0.735202277664352 | bayes_pls_golite062009 |
| protein binding | 0.599295362610273 | bayes_pls_golite062009 |
