| Protein: | gi|15231966, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15231966, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
330.0 | [0..2] | [435..13] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MVHPLVDRAT SDMLIGPDWA MNLEICDMLN HEPGQTREVV SGIKKRLTSR TSKVQLLALT 60
61 LLETIITNCG ELIHMQVAEK DILHKMVKMA KRKPNIQVKE KILILIDTWQ ESFSGPQGRH 120
121 PQYYAAYQEL LRAGIVFPQ
|
| Detection Method: |  |
| Confidence: | 54.09691 |
| Match: | 1elkA |
| Description: | Tom1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [140-318] |
1 11 21 31 41 51
| | | | | |
1 RPQITPSSGQ NGPSTRYPQN SRNARQEAID TSTESEFPTL SLTEIQNARG IMDVLAEMMN 60
61 AIDGNNKEGL KQEVVVDLVS QCRTYKQRVV HLVNSTSDES MLCQGLALND DLQRLLAKHE 120
121 AIASGNSMIK KEEKSKKEVP KDTTQIIDVG SSETKNGSVV AYTTNGPKID LLSGDDFET
|
| Detection Method: | |
| Confidence: | 20.30103 |
| Match: | 1wrdA |
| Description: | Crystal structure of Tom1 GAT domain in complex with ubiquitin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [319-481] |
1 11 21 31 41 51
| | | | | |
1 PNADNSLALV PLGPPQPSSP VAKPDNSIVL IDMLSDNNCE SSTPTSNPHA NHQKVQQNYS 60
61 NGFGPGHQEQ SYYGQGSSAP VWNLQITQQP SSPAYGNQPF SPNFSPPASP HYGGQNNNVL 120
121 ALPPPPWEAQ SPSSSPQYSP THPMQVTQVV ITTHTHQPLG YNP
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [482-607] |
1 11 21 31 41 51
| | | | | |
1 QGGSPHATNN NNNNMFGMFL PPMTGGHMPP PFGHNGHVTN NNYNPNMYGG YGGQAQPPQQ 60
61 YLVEQQMYGM SLQDNGNNNT NPYQVSSHQP PPMMKPMNKK PEDKLFGDLV ELSKFKKPTS 120
121 GRAGSM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
