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View Structure Prediction Details

Protein: gi|2827535, gi|1...
Organism: Arabidopsis thaliana
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2827535, gi|1....

Description E-value Query
Range
Subject
Range
gi|21748769 - gi|21748769|dbj|BAC03483.1| unnamed protein product [Homo sapiens]
324.0 [0..12] [315..76]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAKINSFFK PSSSSSIAAS VTTDTDDGLA VWENNRNAIV NTYQRRSAIT ERSEVLKGCI  60
   61 EKTLKKGSSS VPKNHKKKRN YTQFHLELGQ SDFLLRHCAE CGAKYAPGDE LDEKNHQSFH 120
  121 KDYMYGLPFK R

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.951
Match: 1zr9A
Description: Solution Structure of a Human C2H2-type Zinc Finger Protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.304205134456748 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [132-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLDKLLGVYI WSQGWQNEKA FTSPLFIKNR IVMVSENDSP AHRNKVQEVV KMMEVELGED  60
   61 WILHQHCKVY LFISSQRISG CLVAEPIKEA FKLIASPDDE RQLQKESSSS PSTSIQFGNI 120
  121 VLQREVSKRC RTSDDRLDNG VIVCEEEAKP AVCGIRAIWV SPSNRRKGIA TWLLDTTRLT 180
  181 TLANYLKQLS W

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1u6mA
Description: The crystal structure of acetyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.29304613876495 bayes_pls_golite062009
transferase activity 0.980842070604467 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.719994014502578 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.599275377825458 bayes_pls_golite062009
acyltransferase activity 0.570805622006811 bayes_pls_golite062009
N-acyltransferase activity 0.152914146121788 bayes_pls_golite062009
acetyltransferase activity 0.147344178874961 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle