| Protein: | gi|6562307, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 282 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6562307, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..1] | [236..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MASSDDPAPE NNHVSVLARQ ARNPPTHFFF PHNPSPRTYY FSAPPQIYFI SDIYLPPPPS 60
61 IWVYYPLWYI NPNPNVYEST
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-282] |
1 11 21 31 41 51
| | | | | |
1 QELPQRYSPN PSQEMTLPPT SSRRVFGRRS YELCEKVTWR TSIKPEVESN GDHITTVMLR 60
61 NIPNRYTREM MIQFMDKHCE EANKSGKNEE FTISAYDFIY LPIDFRTTMN KGYAFVNFTN 120
121 AKAVSKFKAA CNNKPWCHFY SKKELEITYA RIQANELVKR FQHMTYPEEA YSAVCFSPAR 180
181 SGGKDTVQTT MVGKCNEPVC SV
|
| Detection Method: | |
| Confidence: | 3.99 |
| Match: | 1hl6A |
| Description: | CG8781 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.787118623292657 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0269483316710413 | bayes_pls_golite062009 |
