| Protein: | ALMTC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALMTC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
355.0 | [0..1] | [556..1] |
|
Region A: Residues: [1-237] |
1 11 21 31 41 51
| | | | | |
1 MSNKVHVGSL EMEEGLSKTK WMVLEPSEKI KKIPKRLWNV GKEDPRRVIH ALKVGLSLTL 60
61 VSLLYLMEPL FKGIGSNAIW AVMTVVVVLE FSAGATLCKG LNRGLGTLIA GSLAFFIEFV 120
121 ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS 180
181 VINIAHDRFY TIAVGCGICL FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEY
|
| Detection Method: |  |
| Confidence: | 62.769551 |
| Match: | PF01027.11 |
| Description: | No description for PF01027.11 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [238-560] |
1 11 21 31 41 51
| | | | | |
1 FEEKEKEKTD SKDRIYEGYQ AVLDSKSTDE TLALYANWEP RHTLRCHRFP CQQYVKVGAV 60
61 LRQFGYTVVA LHGCLQTEIQ TPRSVRALFK DPCVRLAGEV CKALTELADS ISNHRHCSPE 120
121 ILSDHLHVAL QDLNSAIKSQ PKLFLGSNLH RHNNKHQNGS ISNNKHHQRN SSNSGKDLNG 180
181 DVSLQNTETG TRKITETGSR QGQNGAVSLS SFRTDTSALM EYRRSFKNSN SEMSAAGERR 240
241 MLRPQLSKIA VMTSLEFSEA LPFAAFASLL VEMVARLDNV IEEVEELGRI ASFKEYDNKR 300
301 DQTADDVRCE NPANVTISVG AAE
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
