YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MBF1B_ARATH
Organism: Arabidopsis thaliana
Length: 142 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MBF1B_ARATH.

Description E-value Query
Range
Subject
Range
MBF1A_ARATH - Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A PE=2 SV=1
127.0 [0..1] [142..1]

Back

Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGIGPITQD WEPVVIRKRA PNAAAKRDEK TVNAARRSGA DIETVRKFNA GSNKAASSGT  60
   61 SLNTKKLDDD T

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.337242
Match: PF08523.1
Description: No description for PF08523.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [72-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENLSHDRVPT ELKKAIMQAR GEKKLTQSQL AHLINEKPQV IQEYESGKAI PNQQILSKLE  60
   61 RALGAKLRGK K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.0
Match: 1x57A
Description: Solution structures of the HTH domain of human EDF-1 protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle