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View Structure Prediction Details

Protein: PLP7_ARATH
Organism: Arabidopsis thaliana
Length: 488 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLP7_ARATH.

Description E-value Query
Range
Subject
Range
PLP6_ARATH - Patatin-like protein 6 OS=Arabidopsis thaliana GN=PLP6 PE=2 SV=1
402.0 [0..1] [481..5]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS  60
   61 YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKICILSIDG GGMRGILPGK ALAYLEHALK SKSGDPNARI ADYFDVAAGS GIGGIYTAML  60
   61 FGSRDGNRPI FKADDTWQFL TRNAKGLYGG AGILKRVLRT GSGCCSGTAK LKKVMKESFS 120
  121 ELTLKDTLKP VLIPCYDLKS SGPFLFSRAD ALETDGYDFR LSEVCRATWA EPGVFEPVEM 180
  181 KSVDGQTKCV AVGGGLAMSN PTAAAITHVL HNKQEFPFVR GVEDLLVLSL GMGQLLDVSY 240
  241 EYDRIIKWKA KHWARPAALI SNDGAADTVD QAVAMAFGHC RSSNYVRIQA NGSNLGPWSP 300
  301 NMDTDPSGSN VNMLMGVAEE MLKQKNVESV LFGGKRIDEQ SNFEKLDWLA GELVLEHQRR 360
  361 NSRIAPTVAF KQSVHRADQK TSDKDIGVTA RER

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.30103
Match: 1oxwA
Description: Patatin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.15125075554295 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle