YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GGLO1_ARATH
Organism: Arabidopsis thaliana
Length: 595 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGLO1_ARATH.

Description E-value Query
Range
Subject
Range
GGLO6_ARATH - Probable L-gulonolactone oxidase 6 OS=Arabidopsis thaliana GN=GULLO6 PE=3 SV=1
423.0 [0..2] [581..15]

Back

Predicted Domain #1
Region A:
Residues: [1-595]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFWLSLIFF CFCTFASSTP PDDPVKCESG NNMCTVTNSY GAFPDRSICE AAKVEYPKTE  60
   61 AELVSIVAAA TRAGQKVRVV TRYVHSIPKL VCTDGKDGVL ISTKFLNNVV GTNPEAKTLT 120
  121 VESGVTLRQL IGEAAELELA LPHAPYWWGL TVGGLMGTGA HGSSLWGKGS AVHDYVSEIR 180
  181 MVSPGLASDG YVKVRVLSET IDPDEFRAAK VSLGVLGVIS QVTFQLQPMF KRSLTFVMQN 240
  241 DSDFGDQAVT FGEKHEFADF LWLPSQGKVV YRMDDRVPVN TSGNGLFDFF PFRPQLSVAL 300
  301 AIIRSLEESE ESSGDANDKC ARAEQITSFL FSISYGVTNN GMEFTGYPVI GKQNHMMSSG 360
  361 TCLDSHQDGL ITSCPWDPRI KGQFFHQTAF SIPLTRVKGF INDIKALVKI EPKSLCALER 420
  421 SNGILIRYVT SSPAFLGKEE KALDFDLTYY RSKDDPLAPR LYEDFIEEIE QMAIFKYNAL 480
  481 PHWGKNRNLA FDGVIRKYKN ANTFLKVKER FDPLGLFSTE WTNQILGLKG NVTIVKEGCA 540
  541 LEGLCVCSDD AHCAPKKGYL CRPGKVYTKA RVCTHVKSVN GYDDHTKFNL MFNRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 1w1oA
Description: Native Cytokinin Dehydrogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle