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View Structure Prediction Details

Protein: PGPS2_ARATH
Organism: Arabidopsis thaliana
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGPS2_ARATH.

Description E-value Query
Range
Subject
Range
PGPS1_ARATH - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic OS=Arabidopsis t...
143.0 [0..8] [232..75]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEEDTATVD QNSFGGGKDS LLRNRHSSPL PSPTQLSSKV ITLPTVLTLG RVAAVPILVA  60
   61 TFYVD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [66-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CWWGRTATTS IFIAAAITDW LDGYIARKMR LGSEFGAFLD PVADKLMVAA TLILLCTKPM  60
   61 VAVVLGPVPW LVTVPSIAII GREITMSAVR EWAASQNGKL SEAVAVNSLG KWKTATQMIA 120
  121 LTILLASRDS SFERLLPSGI GLLYVSAGLS IWSLVVYMRK IWRVLLKK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.19382
Match: PF01066.12
Description: No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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