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View Structure Prediction Details

Protein: gi|15229017, gi|...
Organism: Arabidopsis thaliana
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15229017, gi|....

Description E-value Query
Range
Subject
Range
gi|186682770, gi... - gi|23128859|ref|ZP_00110697.1| COG1020: Non-ribosomal peptide synthetase modules and related protein...
323.0 [0..21] [430..42]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVASSEFIVT RKNPELIPPV SETPNGHYYL SNLDQNIAII VKTLYYYKSE SRTNQESYNV  60
   61 IKKSLSEVLV HYYPVAGRLT ISPEGKIAVN CTGEGVVVVE AEANCGIDTI KEAISENRME 120
  121 TLEKLVYDVP GARNILEIPP VVVQVTNFKC GGFVLGLGMS HNMFDGVAAA EFLNSWCEMA 180
  181 KGLPLSVPPF LDRTILRSRN PPKIEFPHNE FDEIEDISDT GKIYDEEKLI YKSFLFEPEK 240
  241 LEKLKIMAIE ENNNNKVSTF QALTGFLWKS RCEALRFKPD QRVKLLFAAD GRSRFIPRLP 300
  301 QGYCGNGIVL TGLVTSSGEL VGNPLSHSVG LVKRLVELVT DGFMRSAMDY FEVNRTRPSM 360
  361 NATLLITSWS KLTLHKLDFG WGEPVFSGPV GLPGREVILF LPSGDDMKSI NVFLGLPTSA 420
  421 MEVFEELMKI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.30103
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle