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View Structure Prediction Details

Protein: Y3130_ARATH
Organism: Arabidopsis thaliana
Length: 490 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y3130_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592646 - gi|21592646|gb|AAM64595.1| putative protein kinase [Arabidopsis thaliana]
400.0 [0..10] [490..2]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFDSVKVME NWQSKTSNEN EKKKKKRRRK KNNNVRNSEH YEEEANGCWV KFRYIVCCAS  60
   61 STSDVETSLT LSTSTV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSQSAIVQSN DQPVGPVSST TTTSNAESSL STPIISEELN IYSHLKKFSF IDLKLATRNF  60
   61 RPESLLGEGG FGCVFKGWVE ENGTAPVKPG TGLTVAVKTL NPDGLQGHKE WLAEINYLGN 120
  121 LLHPNLVKLV GYCIEDDQRL LVYEFMPRGS LENHLFRRSL PLPWSIRMKI ALGAAKGLSF 180
  181 LHEEALKPVI YRDFKTSNIL LDGEYNAKLS DFGLAKDAPD EGKTHVSTRV MGTYGYAAPE 240
  241 YVMTGHLTSK SDVYSFGVVL LEMLTGRRSM DKNRPNGEHN LVEWARPHLL DKRRFYRLLD 300
  301 PRLEGHFSVK GAQKVTQLAA QCLSRDSKIR PKMSEVVEVL KPLPHLKDMA SASYYFQTMQ 360
  361 AERLKAGSGS GSGRGFGSRN GQPVFRTLSS PHGQAGSSPY RHQIPSPKPK GATT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.30103
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle