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View Structure Prediction Details

Protein: CRS1_ARATH
Organism: Arabidopsis thaliana
Length: 718 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRS1_ARATH.

Description E-value Query
Range
Subject
Range
CRS1_MAIZE - Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=...
633.0 [0..68] [713..21]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNGINILSY PRFLSFCEVF VLLLCNFSDN PKLQTFTQML NSLFLSARAF PSLITNSSSR  60
   61 RAKSSQFDQF RENRGVSDAA IKVPTAPWMK GPLLLRPDEI LDTKKRNKPR KVEEKTFKAL 120
  121 NRRESGVRGK KAMKKIVRNV EKLDEDSDSE ETQMDDLSEF EYLGRIEEKV ESKDRFGGKM 180
  181 PWEREEERFI LRRMKKESVP TTA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELILDEGLLN RLRREASKMR KWVNVRKAGV TELVVNKIKS MWKLNELAMV RFDVPLCRNM  60
   61 ERAQEIIETG GLVVLSKKEF LVVYRGGPSY SSEGQDEISS S

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.51
Match: 1ln4A
Description: hypothetical protein YhbY
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [305-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYEREADRLL DGLGPRYMDW WMRRPFPVDA DLLPEVVNGY MTPSRRCPPN TRAKLTDEEL  60
   61 TYLRNIAQPL PFHFVLGRNY GLQGLASAIV KLWEKCIIAK IAIKWGALNT NNEEMADELR 120
  121 YLTGGVLILR NKYLIVLYRG KDFLSDEVAD LVEDRERLLS RYQHFEETKR ESDIELLEVV 180
  181 TNGKQLKETN KSGTLLEFQE LQRKFGEMDP RNLETEAEKA RLEKELKSQE HKLSILKSKI 240
  241 EKSNMELFKL NSLWKPSEGD DDIEI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [570-718]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTNEERECLR RIGLKMNSSL VLGRRGVFFG VMEGLHQHWK HREVAKVITM QKLFSRVVYT  60
   61 AKALETESNG VLISIEKLKE GHAILIYRGK NYKRPSSKLM AQNLLTKRKA LQRSVVMQRL 120
  121 GSLKFFAYQR ERAIEDLKVS LVNLQDSAF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.0
Match: 1jo0A
Description: YhbY homologue HI1333
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle