| Protein: | LYK5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 664 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LYK5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
365.0 | [0..3] | [655..345] |
|
Region A: Residues: [1-223] |
1 11 21 31 41 51
| | | | | |
1 MAACTLHALS VTLFLLLFFA VSPAKAQQPY VNNHQLACEV RVYDNITNGF TCNGPPSCRS 60
61 YLTFWSQPPY NTADSIAKLL NVSAAEIQSI NNLPTATTRI PTRELVVIPA NCSCSSSSGG 120
121 FYQHNATYNL SGNRGDETYF SVANDTYQAL STCQAMMSQN RYGERQLTPG LNLLVPLRCA 180
181 CPTAKQTTAG FKYLLTYLVA MGDSISGIAE MFNSTSAAIT EGN
|
| Detection Method: |  |
| Confidence: | 14.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [224-340] |
1 11 21 31 41 51
| | | | | |
1 ELTSDNIFFF TPVLVPLTTE PTKIVISPSP PPPPVVATPP QTPVDPPGSS SSHKWIYIGI 60
61 GIGAGLLLLL SILALCFYKR RSKKKSLPSS LPEENKLFDS STKQSIPTTT TTQWSID
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [341-664] |
1 11 21 31 41 51
| | | | | |
1 LSNSSEAFGL KSAIESLTLY RFNDLQSATS NFSDENRIKG SVYRATINGD DAAVKVIKGD 60
61 VSSSEINLLK KLNHSNIIRL SGFCIREGTS YLVFEYSENG SISDWLHSSG KKSLTWKQRV 120
121 EIARDVAEAL DYLHNYITPP HIHKNLESTN ILLDSNFRAK IANFGVARIL DEGDLDLQLT 180
181 RHVEGTQGYL APEYVENGVI TSKLDVFAFG VAVLELLSGR EAVTIHKKKE GEEEVEMLCK 240
241 VINSVLGGEN VREKLKEFMD PSLGNEYPLE LAYTMAQLAK SCVATDLNSR PSVTQVLTTL 300
301 SMIVSSSIDW EPSDDLLRSG SLGN
|
| Detection Method: | |
| Confidence: | 61.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
