| Protein: | DOF43_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 232 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOF43_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..1] | [232..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MDNFNVVANE DNQVNDVKPP PPPPRVCARC DSDNTKFCYY NNYSEFQPRY FCKNCRRYWT 60
61 HGGALRNVPI GGSSRAKRTR INQPSVAQMV SVGIQPGSHK PFFNVQENND FVGSFGASSS 120
121 SF
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 1jocA |
| Description: | Eea1; Eea1 homodimerisation domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [123-232] |
1 11 21 31 41 51
| | | | | |
1 VAAVGNRFSS LSHIHGGMVT NVHPTQTFRP NHRLAFHNGS FEQDYYDVGS DNLLVNQQVG 60
61 GYVDNHNGYH MNQVDQYNWN QSFNNAMNMN YNNASTSGRM HPSHLEKGGP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.405 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.347 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.336 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.331 | a.118.1 | ARM repeat |
