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View Structure Prediction Details

Protein: gi|11357880, gi|...
Organism: Arabidopsis thaliana
Length: 142 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11357880, gi|....

Description E-value Query
Range
Subject
Range
gi|4138137, gi|7... - gi|7939619|gb|AAF70822.1|AF154421_1 beta-galactosidase [Lycopersicon esculentum], gi|4138137|emb|CAA...
182.0 [0..15] [140..704]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDSHCRCLH GFILLVVLFL SFVFSFASKI DVSFHGDEKR SLSSSINSSL SESAEYTMCA  60
   61 THKEAKDGKP IALDFDCEQG YVISKITYAD YGQSTGSCGK FKRGNCGASN TLNIVNKKCL 120
  121 RKEKCKLFVP DKIFGPSHCK GA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.180456
Match: PF02140.9
Description: No description for PF02140.9 was found.

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle