| Protein: | gi|12322267, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 282 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12322267, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
234.0 | [0..13] | [272..77] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MSKKHLKPLE TCFEDEEDDV IYLPPGLVTG ATSKKNEEFC GGSGKVQPSE MKRRSEGTST 60
61 DMTSKRAKKV SAEDEKK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [78-194] |
1 11 21 31 41 51
| | | | | |
1 VGEWTKNPYF QRLWSEEDEI VMLQGIIKFE DVTGKSPFED RHGFIEFVKN SISFEASVQQ 60
61 YIGKISQLKR KYTRKRKNGF SEGHEQKCFK LAMSIWGTKE TSKKTDLCSS PKGKKVK
|
| Detection Method: | |
| Confidence: | 55.721246 |
| Match: | PF04504.5 |
| Description: | No description for PF04504.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.870 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.836 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.723 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.719 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.695 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
|
Region A: Residues: [195-282] |
1 11 21 31 41 51
| | | | | |
1 EEDGDVTNSD WFENSFLLPS IESLGVDSVK RKWNVVPMEF KKKIEERLEL LEADESECKK 60
61 MEEMLKVKNS ECVKQKTNLL NEVIDVMT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.654 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.615 | a.74.1 | Cyclin-like |
| View | Download | 0.590 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.546 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.499 | i.11.1 | Computational models partly based on NMR data |
