| Protein: | gi|7487754, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 682 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487754, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
576.0 | [0..8] | [679..344] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MEKVELPVHE HPLFIFDRIC MDTCKGCSVF GYFYGGYVCN EVGCDTLFHK ECVESVPEIK 60
61 HPSHPQHPLK LNLKCGRFCC SLCISGLQVG YHCSICDFNV HLVCARRPPS STSSSSSSSP 120
121 LPTSVDNSKV HQHPLLLSKN VETFLLKEGR NCNMCNTNIK INEKQLCECR LCNILFHLDC 180
181 VGLIPNVYQT
|
| Detection Method: |  |
| Confidence: | 42.0 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [191-370] |
1 11 21 31 41 51
| | | | | |
1 SHPKHPLKFL QYGAPEYAHE KCLLCKKKFK KLSNNYDRVY HCDVCNVTIC KDYCMAKPPP 60
61 VSVVSPTTHE HQLHLVPRLV NFTCNACGTA GDRSPYFCLQ CNFMIHRACI DLPRVININR 120
121 HNHRISYTSL LGHGNWTCGV CRKKVDGFYG AYSCSKCPSY AVHARCATRK DVWYKVELEG 180
181
|
| Detection Method: | |
| Confidence: | 2.27 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0196698141692984 | bayes_pls_golite062009 |
|
Region A: Residues: [371-563] |
1 11 21 31 41 51
| | | | | |
1 TPEEEEIAPF EVVDENLIKH FIHGHNLRLN KDGNHESKFC EACASKINND PFYGCEQCDF 60
61 ILHETCASLP RKIRHVSNNK PLILSTDTYL KDSPRQRRHC SACFQNFSGF RYETQSRNLF 120
121 GSATLDVRCS SIYEPFLHES HPHPLYFSLE GDTKCSACDI TYSARDMLCC DECEFRLDFR 180
181 CATLPRKVMN QRY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [564-682] |
1 11 21 31 41 51
| | | | | |
1 DDHPLYLSYG ENKEDGQLWC EVCETKVDPK EWLYTCNLCG IILHISCVVG DFSYHVPGHI 60
61 SSNKIANGVV VPNTSICRPH CSRCSSRCKL PYILQINDFY FCSNKCCGNT RNPRGRNYY
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1x6hA |
| Description: | Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
