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View Structure Prediction Details

Protein: NDF5_ARATH
Organism: Arabidopsis thaliana
Length: 354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDF5_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592818 - gi|21592818|gb|AAM64767.1| unknown [Arabidopsis thaliana]
332.0 [0..1] [354..1]

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Predicted Domain #1
Region A:
Residues: [1-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVHYMNVS RSTFPLSRSS KINLSSSFAS LPLQFHKNIK RLESSVPPSA SASASPAFPI  60
   61 DVEYLRREFS GHGATFEDIG ETCIARLKLD NGSSANVMLT RGMITSYKVR VWHGGKVELL 120
  121 HTWVEQEEEE VVIRGGVSSA FRSSDSDEIS DWRLQGISGD SKDCVQMELR RSDKKIKEIE 180
  181 LKQIISLREN TLSIELSMTN KGISPIKLEG CSLVSYLTVS TPEATYAVGL EGSDFVETTP 240
  241 FLPRFGVVQG EKEEEKPGFG GEEESNYKQL NREMSRIYTC APKSFTVIDR GRRNSVVVGR 300
  301 EGFEEVYMYS PGSRLESYTK SAYVCIGPSS LLSPISLESG CVWRGVLHLH NPNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.154902
Match: 1jovA
Description: Hypothetical protein HI1317
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.24087518312023 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle