YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ACR4L_ARATH
Organism: Arabidopsis thaliana
Length: 895 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for ACR4L_ARATH.

Predicted Domain #1
Region A:
Residues: [1-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMFETRARE WILLVKLVLF TSIWQLASAL GSMSSIAISY GEGGSVFCGL KSDGSHLVVC  60
   61 YGSNSAILYG TPGHLQFIGL TGGDGFMCGL LMLSHQPYCW GNSAFIQMGV PQPMTKGAEY 120
  121 LEVSAGDYHL CGLRKPIVGR RKNSNIISSS LVDCWGYNMT RNFVFDKQLH SLSAGSEFNC 180
  181 ALSSKDKSVF CWGDENSSQV ISLIPKEKKF QKIAAGGYHV CGILDGLESR VLCWGKSLEF 240
  241 EEEVTGTSTE EKILDLPPKE PLLAVVGGKF YACGIKRYDH SAVCWGFFVN RSTPAPTGIG 300
  301 FYDLAAGNYF TCGVLTGTSM SPVCWGLGFP ASIPLAVSPG LCIDTPCPPG THELSNQENS 360
  361 PCKFTGSHIC LPCSTSCPPG MYQKSVC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 1o6sA
Description: Internalin A
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [388-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TERSDQVCVY NCSSCSSHDC SSNCSSSATS GGKEKGKFWS LQLPIATAEI GFALFLVAVV  60
   61 SITAALYIRY RLRNCRCSEN DTRSSKDSAF TKDNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [483-807]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIRPDLDELQ KRRRARVFTY EELEKAADGF KEESIVGKGS FSCVYKGVLR DGTTVAVKRA  60
   61 IMSSDKQKNS NEFRTELDLL SRLNHAHLLS LLGYCEECGE RLLVYEFMAH GSLHNHLHGK 120
  121 NKALKEQLDW VKRVTIAVQA ARGIEYLHGY ACPPVIHRDI KSSNILIDEE HNARVADFGL 180
  181 SLLGPVDSGS PLAELPAGTL GYLDPEYYRL HYLTTKSDVY SFGVLLLEIL SGRKAIDMHY 240
  241 EEGNIVEWAV PLIKAGDINA LLDPVLKHPS EIEALKRIVS VACKCVRMRG KDRPSMDKVT 300
  301 TALERALAQL MGNPSSEQPI LPTEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.69897
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #4
Region A:
Residues: [808-895]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLGSSRMHKK SWRIGSKRSG SENTEFRGGS WITFPSVTSS QRRKSSASEG DVAEEEDEGR  60
   61 KQQEALRSLE EEIGPASPGQ SLFLHHNF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 1sggA
Description: THE SOLUTION STRUCTURE OF SAM DOMAIN FROM THE RECEPTOR TYROSINE KINASE EPHB2, NMR, 10 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle