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View Structure Prediction Details

Protein: FTZ21_ARATH
Organism: Arabidopsis thaliana
Length: 478 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FTZ21_ARATH.

Description E-value Query
Range
Subject
Range
TBB2_HOMAM - Tubulin beta-2 chain OS=Homarus americanus PE=2 SV=1
401.0 [0..62] [450..5]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATYVSPCFT PSDSRLLTVL RKNVLPENHL GRLNSIRTID SKKNRVVVAA QKSESSPIRN  60
   61 SPRHYQSQAQ DPFLNLHPEI SMLRGEGTST IVNPRKETSS GPVVEDF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEPSAPSNYN EARIKVIGVG GGGSNAVNRM IESEMSGVEF WIVNTDIQAM RMSPVLPDNR  60
   61 LQIGKELTRG LGAGGNPEIG MNAARESKEV IEEALYGSDM VFVTAGMGGG TGTGAAPVIA 120
  121 GIAKAMGILT VGIATTPFSF EGRRRTVQAQ EGLASLRDNV DTLIVIPNDK LLTAVSQSTP 180
  181 VTEAFNLADD ILRQGVRGIS DIITIPGLVN VDFADVRAIM ANAGSSLMGI GTATGKSRAR 240
  241 DAALNAIQSP LLDIGIERAT GIVWNITGGS DLTLFEVNAA AEVIYDLVDP TANLIFGAVV 300
  301 DPALSGQVSI TLIATGFKRQ EEGEGRTVQM VQADAASVGA TRRPSSSFRE SGSVEIPEFL 360
  361 KKKGSSRYPR V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.69897
Match: 2vamA
Description: No description for 2vamA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle