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View Structure Prediction Details

Protein: XXT3_ARATH
Organism: Arabidopsis thaliana
Length: 457 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XXT3_ARATH.

Description E-value Query
Range
Subject
Range
gi|55956986 - gi|55956986|emb|CAI11457.1| putative glycosyltransferase [Solanum tuberosum]
591.0 [0..1] [457..1]
gi|55956988 - gi|55956988|emb|CAI11458.1| putative glycosyltransferase [Nicotiana benthamiana]
589.0 [0..1] [457..1]
XXT5_ARATH - Probable xyloglucan 6-xylosyltransferase 5 OS=Arabidopsis thaliana GN=XXT5 PE=1 SV=1
585.0 [0..1] [452..1]
gi|55956984 - gi|55956984|emb|CAI11456.1| putative glycosyltransferase [Lotus japonicus]
557.0 [0..35] [457..19]
gi|162464392, gi... - gi|84794314|emb|CAJ57382.1| putative glycosyltransferase [Zea mays], gi|162464392|ref|NP_001105849.1...
527.0 [0..1] [446..1]
gi|55956970 - gi|55956970|emb|CAI11449.1| alpha-1,6-xylosyltransferase [Vitis vinifera]
524.0 [0..36] [455..7]
gi|55956972 - gi|55956972|emb|CAI11450.1| alpha-1,6-xylosyltransferase [Pinus taeda]
520.0 [0..24] [455..3]
gi|84794310 - gi|84794310|emb|CAJ57380.1| alpha-1,6-xylosyltransferase [Physcomitrella patens]
519.0 [0..17] [438..6]
GT2_ORYSI - Probable glycosyltransferase 2 OS=Oryza sativa subsp. indica GN=GT2 PE=3 SV=1
GT2_ORYSJ - Probable glycosyltransferase 2 OS=Oryza sativa subsp. japonica GN=GT2 PE=2 SV=1
504.0 [0..1] [446..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT  60
   61 ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD PTDSNEPPDS DLDLNMTYTL 120
  121 GPKITNWDQK RKLWLTQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPDFPSFING KAKVLLLTGS PPKPCDNPIG DHYLLKSVKN KIDYCRIHGI EIVYNMAHLD  60
   61 KELAGYWAKL PMIRRLMLSH PEIEWIWWMD SDALFTDMVF EIPLSRYENH NLVIHGYPDL 120
  121 LFDQKSWIAL NTGSFLFRNC QWSLDLLDAW APMGPKGPIR EEAGKILTAN LKGRPAFEAD 180
  181 DQSALIYLLL SQKETWMEKV FVENQYYLHG FWEGLVDKYE EMMEKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.522879
Match: 2p6wA
Description: No description for 2p6wA was found.

Predicted Domain #3
Region A:
Residues: [364-457]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPGLGDERWP FITHFVGCKP CGSYADYAVE RCLKSMERAF NFADNQVLKL YGFGHRGLLS  60
   61 PKIKRIRNET TFPLKFVDRF DIRRTTPLKI EARS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle