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View Structure Prediction Details

Protein: gi|9759485, gi|1...
Organism: Arabidopsis thaliana
Length: 1087 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|9759485, gi|1....

Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGGKGEKI LVSVRVRPQN EKEKARNDIC DWECVNNTTI VCNNNLPERS LFPSTYTFDK  60
   61 VFGFDSPTKQ VYEDGAKEVA LCVLGGINSS IFAYGQTSSG KTYTMCGITK FAMDDIFCYI 120
  121 QKHTDRKFTL KFSAIEIYNE AVRDLLSGDN NQRRLLDDPE RGTVVEKLIE ETIQDRTHLE 180
  181 ELLTVCETQR KIGETSLNEV SSRSHQILRL TIESTGREYS PDSSSTLAAS VCFIDLAGSE 240
  241 RASQTLSAGT RLKEGCHINR SLLTLGTVIR KLRFDPCDIA QSQVENLLKS TAEERSSRMD 300
  301 EQSMFSSMDF DADFRRRSYD STDLGEPSII NNLTERNFEF LENSEED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.221849
Match: 3b6uA
Description: No description for 3b6uA was found.

Predicted Domain #2
Region A:
Residues: [348-1087]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFLLDDKTPQ FSRHNLYDDW EELVQITDER LEDACKEVRC IEPEAEQSSG QPAACESHDS  60
   61 LDDIVDKIAI SEVLSPRKEE TLPGLEHEQS YNPSTGIEKA ENEDMEISIP AAKEETLPAL 120
  121 EYEQSYNSYT GNERAENEVM EISTPRKDEP LSALEYEQSY NSSTSNEKAE NEDMEISTPA 180
  181 EKENVDLSLK TIDVNAKPET YELTLKNSDL EIGPSVEAQE SQESVNEEEQ MKNEERKMSP 240
  241 STKQAEQCLN KEENAQSEQQ STEDCELNSL PINNQSEATV EVELTPNDAK LDEDATSRDK 300
  301 WESKQQQEAD KDCNESSVCK NIGTDDNDND TYMALKEKVK EMQKKIEYLM SMHTAEQQQS 360
  361 PSFRRDFKSP PEYFTAKRSR SCRENLLSVR SPHWFESLEV SNNTSPTWRV MQTKASPGRP 420
  421 NTSSISFDSG SSTSIDTRSL KDYDPEMGNS FREFVAGLEE MAKKHHSIDS TPELDYGIPY 480
  481 APTKTERMEI RPESPADSVR GNENALPNPQ DINKETTDAT NNQSQREQVG DSVEEAKPKE 540
  541 TDSTEASQEK LQVAANGQYS ISSSDFERQQ RKIIELWAAC NVPLVHRTYF FLLFKGDPSD 600
  601 YVYMEVELRR LSFLKQTISN DMETSRMQTV KALTREKEWI SKQLPKKFPW NQRIGLYQKW 660
  661 GVEVNSKQRS LQVAHKLWTN TQDMDHIKES ASLVAKLLGF VEPSRMPKEM FGLSLLPRTE 720
  721 NVKSSGWRFT KSFSAIRLTR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.221849
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle