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View Structure Prediction Details

Protein: ACBP4_ARATH
Organism: Arabidopsis thaliana
Length: 668 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACBP4_ARATH.

Description E-value Query
Range
Subject
Range
gi|42572263 - gi|42572263|ref|NP_974227.1| ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding [Arabidopsis thali...
419.0 [0..1] [668..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN  60
   61 TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED DPGWYSRASN DIPD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.30103
Match: 2copA
Description: Solution structure of RSGI RUH-040, an ACBP domain from human cDNA
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [115-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVVDVQINRA KDEPVVENGS TFSETKTIST ENGRLAETQD KDVVSEDSNT VSVYNQWTAP  60
   61 QTSGQRPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.30103
Match: 1u6dX
Description: Crystal structure of the Kelch domain of human Keap1
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [183-534]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARYEHGAAVI QDKMYIYGGN HNGRYLGDLH VLDLKSWTWS RVETKVATES QETSTPTLLA  60
   61 PCAGHSLIAW DNKLLSIGGH TKDPSESMQV KVFDPHTITW SMLKTYGKPP VSRGGQSVTM 120
  121 VGKTLVIFGG QDAKRSLLND LHILDLDTMT WDEIDAVGVS PSPRSDHAAA VHAERFLLIF 180
  181 GGGSHATCFD DLHVLDLQTM EWSRPAQQGD APTPRAGHAG VTIGENWFIV GGGDNKSGAS 240
  241 ESVVLNMSTL AWSVVASVQG RVPLASEGLS LVVSSYNGED VLVAFGGYNG RYNNEINLLK 300
  301 PSHKSTLQTK TLEAPLPGSL SAVNNATTRD IESEVEVSQE GRVREIVMDN VN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.221849
Match: 2eibA
Description: No description for 2eibA was found.

Predicted Domain #4
Region A:
Residues: [535-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGSKVEGNSE RIIATIKSEK EELEASLNKE RMQTLQLRQE LGEAELRNTD LYKELQSVRG  60
   61 QLAAEQSRCF KLEVDVAELR QKLQTLETLQ KELELLQRQK AASEQAAMNA KRQGSGGVWG 120
  121 WLAGSPQEKD DDSP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle