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View Structure Prediction Details

Protein: ISAM1_ARATH
Organism: Arabidopsis thaliana
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISAM1_ARATH.

Description E-value Query
Range
Subject
Range
gi|56381333, gi|... - gi|56421491|ref|YP_148809.1| hypothetical protein GK2956 [Geobacillus kaustophilus HTA426], gi|56381...
167.0 [0..18] [136..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASQILAAA AARVGPALRK QVLTLTDEAA SRVHHLLQQR QKPFLRLGVK ARGCNGLSYT  60
   61 LNYADEKGKF DELVEEKGVR ILVEPKALMH VIGTKMDFVD DKLRSEFVFI NPNSQGQCGC 120
  121 GESFMTTSTS SAKQSAS

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Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 1r94A
Description: Crystal Structure of IscA (MERCURY DERIVATIVE)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
2 iron, 2 sulfur cluster binding 1.80248983815833 bayes_pls_golite062009
iron-sulfur cluster binding 1.47577968990921 bayes_pls_golite062009
metal cluster binding 1.47577968990921 bayes_pls_golite062009
binding 0.0602586837339399 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle