YRC Public Data Repository - Protein Structure Prediction

Protein:	SAU32_ARATH
Organism:	Arabidopsis thaliana
Length:	121 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAU32_ARATH.

Description	E-value	Query Range	Subject Range
gi\|15238919, gi\|... - gi\|8979733\|emb\|CAB96854.1\| putative protein [Arabidopsis thaliana], gi\|88900398\|gb\|ABD57511.1\| At5g1...	131.0	[0..6]	[109..19]
gi\|217075552, gi... - gi\|92870685\|gb\|ABE79956.1\| Auxin responsive SAUR protein [Medicago truncatula], gi\|217075552\|gb\|ACJ8...	124.0	[0..5]	[91..18]
gi\|7488613, gi\|2... - pir\|\|T17020 auxin-induced protein - apple tree, gi\|2924327\|emb\|CAB07785.1\| hypothetical protein [Mal...	123.0	[0..3]	[90..10]
gi\|7442216, gi\|3... - pir\|\|T07798 auxin-induced protein SAUR - radish (fragment), gi\|3043536\|dbj\|BAA25434.1\| SAUR [Raphan...	121.0	[0..3]	[90..9]
ARG7_VIGRR - Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1 gi\|7442222, gi\|2... - pir\|\|T10942 auxin-induced protein 6B - mung bean, gi\|287570\|dbj\|BAA03310.1\| ORF [Vigna radiata]	121.0	[0..7]	[90..8]

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Predicted Domain #1

Region A:
Residues: [1-121]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTGEKTLKS FQLHRKQSVK VKDVPKGCLA IKVGSQGEEQ QRFIVPVLYF NHPLFMQLLK  60
   61 EAEDEYGFDQ KGTITIPCHV EEFRYVQALI DGERSVYNGN NHHHRHGGRD QYHHLVGCFR 120
  121 A

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	38.124939
Match:	PF02519.5
Description:	No description for PF02519.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits